In recent years, dynamic agent-based population models, which model every inhabitant of a country as a statistically representative agent, have been gaining in popularity for decision support. This is mainly due to their high degree of flexibility with respect to their area of application. GEPOC ABM is one of these models. Developed in 2015, it is now a well-established decision support tool and has been successfully applied for a wide range of population-level research questions ranging from health-care to logistics. At least in part, this success is attributable to continuous improvement and development of new methods. While some of these are very application- or implementation-specific, others can be well transferred to other population models. The focus of the present work lies on the presentation of three selected transferable innovations. We illustrate an innovative time-update concept for the individual agents, a co-simulation-inspired simulation strategy, and a strategy for accurate model parametrisation. We describe these methods in a reproducible manner, explain their advantages and provide ideas on how they can be transferred to other population models.

GEPOC, short for Generic Population Concept, is a collection of models and methods for analysing population-level research questions. For the valid application of the models for a specific country or region, stable and reproducible data processes are necessary, which provide valid and ready-to-use model parameters. This work contains a complete description of the data-processing methods for computation of model parameters for Austria, based exclusively on freely and publicly accessible data. In addition to the description of the source data used, this includes all algorithms used for aggregation, disaggregation, fusion, cleansing or scaling of the data, as well as a description of the resulting parameter files. The document places particular emphasis on the computation of parameters for the most important GEPOC model, GEPOC ABM, a continuous-time agent-based population model. An extensive validation study using this particular model was made and is presented at the end of this work.

Recent advances in artificial intelligence, particularly large language models LLMs, have shown promising capabilities in transforming rare disease research. This survey paper explores the integration of LLMs in the analysis of rare diseases, highlighting significant strides and pivotal studies that leverage textual data to uncover insights and patterns critical for diagnosis, treatment, and patient care. While current research predominantly employs textual data, the potential for multimodal data integration combining genetic, imaging, and electronic health records stands as a promising frontier. We review foundational papers that demonstrate the application of LLMs in identifying and extracting relevant medical information, simulating intelligent conversational agents for patient interaction, and enabling the formulation of accurate and timely diagnoses. Furthermore, this paper discusses the challenges and ethical considerations inherent in deploying LLMs, including data privacy, model transparency, and the need for robust, inclusive data sets. As part of this exploration, we present a section on experimentation that utilizes multiple LLMs alongside structured questionnaires, specifically designed for diagnostic purposes in the context of different diseases. We conclude with future perspectives on the evolution of LLMs towards truly multimodal platforms, which would integrate diverse data types to provide a more comprehensive understanding of rare diseases, ultimately fostering better outcomes in clinical settings.

The scarcity of high-quality multimodal biomedical data limits the ability to effectively fine-tune pretrained Large Language Models (LLMs) for specialized biomedical tasks. To address this challenge, we introduce MINT (Multimodal Integrated kNowledge Transfer), a framework that aligns unimodal large decoder models with domain-specific decision patterns from multimodal biomedical data through preference optimization. While MINT supports different optimization techniques, we primarily implement it with the Odds Ratio Preference Optimization (ORPO) framework as its backbone. This strategy enables the aligned LLMs to perform predictive tasks using text-only or image-only inputs while retaining knowledge learnt from multimodal data. MINT leverages an upstream multimodal machine learning (MML) model trained on high-quality multimodal data to transfer domain-specific insights to downstream text-only or image-only LLMs. We demonstrate its effectiveness through two key applications: (1) Rare genetic disease prediction from texts, where MINT uses a multimodal encoder model, trained on facial photos and clinical notes, to generate a preference dataset for aligning a lightweight Llama 3.2-3B-Instruct. Despite relying on text input only, the MINT-derived model outperforms models trained with SFT, RAG, or DPO, and even outperforms Llama 3.1-405B-Instruct. (2) Tissue type classification using cell nucleus images, where MINT uses a vision-language foundation model as the preference generator, containing knowledge learnt from both text and histopathological images to align downstream image-only models. The resulting MINT-derived model significantly improves the performance of Llama 3.2-Vision-11B-Instruct on tissue type classification. In summary, MINT provides an effective strategy to align unimodal LLMs with high-quality multimodal expertise through preference optimization.

Background and Context. The increasing integration of large language models (LLMs) in computing education presents an emerging challenge in understanding how students use LLMs and craft prompts to solve computational tasks. Prior research has used both qualitative and quantitative methods to analyze prompting behavior, but these approaches lack scalability or fail to effectively capture the semantic evolution of prompts. Objective. In this paper, we investigate whether students prompts can be systematically analyzed using propositional logic constraints. We examine whether this approach can identify patterns in prompt evolution, detect struggling students, and provide insights into effective and ineffective strategies. Method. We introduce Prompt2Constraints, a novel method that translates students prompts into logical constraints. The constraints are able to represent the intent of the prompts in succinct and quantifiable ways. We used this approach to analyze a dataset of 1,872 prompts from 203 students solving introductory programming tasks. Findings. We find that while successful and unsuccessful attempts tend to use a similar number of constraints overall, when students fail, they often modify their prompts more significantly, shifting problem-solving strategies midway. We also identify points where specific interventions could be most helpful to students for refining their prompts. Implications. This work offers a new and scalable way to detect students who struggle in solving natural language programming tasks. This work could be extended to investigate more complex tasks and integrated into programming tools to provide real-time support.

In this paper, we present a methodology for the development of embodied conversational agents for social virtual worlds. The agents provide multimodal communication with their users in which speech interaction is included. Our proposal combines different techniques related to Artificial Intelligence, Natural Language Processing, Affective Computing, and User Modeling. Firstly, the developed conversational agents. A statistical methodology has been developed to model the system conversational behavior, which is learned from an initial corpus and improved with the knowledge acquired from the successive interactions. In addition, the selection of the next system response is adapted considering information stored into users profiles and also the emotional contents detected in the users utterances. Our proposal has been evaluated with the successful development of an embodied conversational agent which has been placed in the Second Life social virtual world. The avatar includes the different models and interacts with the users who inhabit the virtual world in order to provide academic information. The experimental results show that the agents conversational behavior adapts successfully to the specific characteristics of users interacting in such environments.

Excitement about the promise of generative AI in medicine has inspired an explosion of new applications. Generative models have the potential to change how care is delivered (1-5), the roles and responsibilities of care providers (6, 7), and the communication pathways between patients and providers (8, 9). Further upstream, generative models have shown promise in improving scientific discovery in medicine (through both clinical trials (10, 11) and observational research (12, 13)) and facilitating medical education (8, 14). These developments are a direct result of technical advances in generative AI, which have drastically increased the ability to generate realistic language and images, and raise important questions about how to integrate generative models into medicine. Generative AI is the latest in a series of technical advances that have driven major shifts in medicine. Past significant advances include the adoption of electronic health records (EHRs); the integration of robotics into telesurgeries (15); and the incorporation of predictive models and continuous monitoring as foundational infrastructure for new diagnostic tools (16, 17).

The increasingly populated cities of the 21st Century face the challenge of being sustainable and resilient spaces for their inhabitants. However, climate change, among other problems, makes these objectives difficult to achieve. The Urban Heat Island (UHI) phenomenon that occurs in cities, increasing their thermal stress, is one of the stumbling blocks to achieve a more sustainable city. The ability to estimate temperatures with a high degree of accuracy allows for the identification of the highest priority areas in cities where urban improvements need to be made to reduce thermal discomfort. In this work we explore the usefulness of image-to-image deep neural networks (DNNs) for correlating spatial and meteorological variables of a urban area with street-level air temperature. The air temperature at street-level is estimated both spatially and temporally for a specific use case, and compared with existing, well-established numerical models. Based on the obtained results, deep neural networks are confirmed to be faster and less computationally expensive alternative for ground-level air temperature compared to numerical models.

Information retrieval (IR) is the task of finding relevant documents in response to a user query. Although Spanish is the second most spoken native language, current IR benchmarks lack Spanish data, hindering the development of information access tools for Spanish speakers. We introduce MessIRve, a large-scale Spanish IR dataset with around 730 thousand queries from Google's autocomplete API and relevant documents sourced from Wikipedia. MessIRve's queries reflect diverse Spanish-speaking regions, unlike other datasets that are translated from English or do not consider dialectal variations. The large size of the dataset allows it to cover a wide variety of topics, unlike smaller datasets. We provide a comprehensive description of the dataset, comparisons with existing datasets, and baseline evaluations of prominent IR models. Our contributions aim to advance Spanish IR research and improve information access for Spanish speakers.

Despite the impressive capabilities of Large Language Models (LLMs) in general medical domains, questions remain about their performance in diagnosing rare diseases. To answer this question, we aim to assess the diagnostic performance of LLMs in rare diseases, and explore methods to enhance their effectiveness in this area. In this work, we introduce a rare disease question-answering (ReDis-QA) dataset to evaluate the performance of LLMs in diagnosing rare diseases. Specifically, we collected 1360 high-quality question-answer pairs within the ReDis-QA dataset, covering 205 rare diseases. Additionally, we annotated meta-data for each question, facilitating the extraction of subsets specific to any given disease and its property. Based on the ReDis-QA dataset, we benchmarked several open-source LLMs, revealing that diagnosing rare diseases remains a significant challenge for these models. To facilitate retrieval augmentation generation for rare disease diagnosis, we collect the first rare diseases corpus (ReCOP), sourced from the National Organization for Rare Disorders (NORD) database. Specifically, we split the report of each rare disease into multiple chunks, each representing a different property of the disease, including their overview, symptoms, causes, effects, related disorders, diagnosis, and standard therapies. This structure ensures that the information within each chunk aligns consistently with a question. Experiment results demonstrate that ReCOP can effectively improve the accuracy of LLMs on the ReDis-QA dataset by an average of 8%. Moreover, it significantly guides LLMs to generate trustworthy answers and explanations that can be traced back to existing literature.